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clustal w program within megalign  (DNASTAR)


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    DNASTAR clustal w program within megalign
    Fig. 1. Molecular characterization of CPB proteasome subunit beta type-5 (CPB-PSMB5). (A) Prediction of signature motifs and alignment of nucleotide sequences of CPB-PSMB5 with other four well-known insect and potato plant PSMB5. Sequence alignment used Clustal W program of <t>MegAlign</t> (DNASTAR, Version 7.0). Species acronyms and GenBank accession numbers of PSMB5 amino acids are listed in Table S1. (B) Predicted three-dimensional structure of CPB-PSMB5 showing key structural domains. Alpha-helices and beta-sheets are depicted in the model as cyan, and yellow, respectively. The beta subunit interaction site domain is highlighted in brown. Green regions represent the active site. (C) Phylogenetic tree of CPB-PSMB5 (highlighted in a red rounded rectangle) and other PSMB5 sequences from different insect orders. The tree was generated with MEGA 7 using Neighbor-joining method. Bootstrap values on nodes were obtained with 1000 replicates. GenBank accession numbers are provided in Supplementary Table S1. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)
    Clustal W Program Within Megalign, supplied by DNASTAR, used in various techniques. Bioz Stars score: 99/100, based on 5593 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/clustal+w+program+within+megalign/10__1016_slash_j__pestbp__2025__106606-62-6-11?v=DNASTAR
    Average 99 stars, based on 5593 article reviews
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    1) Product Images from "Development and efficacy of dsRNA pesticides targeting the Colorado potato beetle with enhanced stability via chitosan formulations"

    Article Title: Development and efficacy of dsRNA pesticides targeting the Colorado potato beetle with enhanced stability via chitosan formulations

    Journal: Pesticide Biochemistry and Physiology

    doi: 10.1016/j.pestbp.2025.106606

    Fig. 1. Molecular characterization of CPB proteasome subunit beta type-5 (CPB-PSMB5). (A) Prediction of signature motifs and alignment of nucleotide sequences of CPB-PSMB5 with other four well-known insect and potato plant PSMB5. Sequence alignment used Clustal W program of MegAlign (DNASTAR, Version 7.0). Species acronyms and GenBank accession numbers of PSMB5 amino acids are listed in Table S1. (B) Predicted three-dimensional structure of CPB-PSMB5 showing key structural domains. Alpha-helices and beta-sheets are depicted in the model as cyan, and yellow, respectively. The beta subunit interaction site domain is highlighted in brown. Green regions represent the active site. (C) Phylogenetic tree of CPB-PSMB5 (highlighted in a red rounded rectangle) and other PSMB5 sequences from different insect orders. The tree was generated with MEGA 7 using Neighbor-joining method. Bootstrap values on nodes were obtained with 1000 replicates. GenBank accession numbers are provided in Supplementary Table S1. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)
    Figure Legend Snippet: Fig. 1. Molecular characterization of CPB proteasome subunit beta type-5 (CPB-PSMB5). (A) Prediction of signature motifs and alignment of nucleotide sequences of CPB-PSMB5 with other four well-known insect and potato plant PSMB5. Sequence alignment used Clustal W program of MegAlign (DNASTAR, Version 7.0). Species acronyms and GenBank accession numbers of PSMB5 amino acids are listed in Table S1. (B) Predicted three-dimensional structure of CPB-PSMB5 showing key structural domains. Alpha-helices and beta-sheets are depicted in the model as cyan, and yellow, respectively. The beta subunit interaction site domain is highlighted in brown. Green regions represent the active site. (C) Phylogenetic tree of CPB-PSMB5 (highlighted in a red rounded rectangle) and other PSMB5 sequences from different insect orders. The tree was generated with MEGA 7 using Neighbor-joining method. Bootstrap values on nodes were obtained with 1000 replicates. GenBank accession numbers are provided in Supplementary Table S1. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)

    Techniques Used: Sequencing, Generated



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    clustal w program within megalign  (DNASTAR)
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    DNASTAR clustal w program within megalign
    Fig. 1. Molecular characterization of CPB proteasome subunit beta type-5 (CPB-PSMB5). (A) Prediction of signature motifs and alignment of nucleotide sequences of CPB-PSMB5 with other four well-known insect and potato plant PSMB5. Sequence alignment used Clustal W program of <t>MegAlign</t> (DNASTAR, Version 7.0). Species acronyms and GenBank accession numbers of PSMB5 amino acids are listed in Table S1. (B) Predicted three-dimensional structure of CPB-PSMB5 showing key structural domains. Alpha-helices and beta-sheets are depicted in the model as cyan, and yellow, respectively. The beta subunit interaction site domain is highlighted in brown. Green regions represent the active site. (C) Phylogenetic tree of CPB-PSMB5 (highlighted in a red rounded rectangle) and other PSMB5 sequences from different insect orders. The tree was generated with MEGA 7 using Neighbor-joining method. Bootstrap values on nodes were obtained with 1000 replicates. GenBank accession numbers are provided in Supplementary Table S1. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)
    Clustal W Program Within Megalign, supplied by DNASTAR, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    clustal w program within the megalign of the dnastar software package  (DNASTAR)
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    DNASTAR clustal w program within the megalign of the dnastar software package
    Fig. 1. Molecular characterization of CPB proteasome subunit beta type-5 (CPB-PSMB5). (A) Prediction of signature motifs and alignment of nucleotide sequences of CPB-PSMB5 with other four well-known insect and potato plant PSMB5. Sequence alignment used Clustal W program of <t>MegAlign</t> (DNASTAR, Version 7.0). Species acronyms and GenBank accession numbers of PSMB5 amino acids are listed in Table S1. (B) Predicted three-dimensional structure of CPB-PSMB5 showing key structural domains. Alpha-helices and beta-sheets are depicted in the model as cyan, and yellow, respectively. The beta subunit interaction site domain is highlighted in brown. Green regions represent the active site. (C) Phylogenetic tree of CPB-PSMB5 (highlighted in a red rounded rectangle) and other PSMB5 sequences from different insect orders. The tree was generated with MEGA 7 using Neighbor-joining method. Bootstrap values on nodes were obtained with 1000 replicates. GenBank accession numbers are provided in Supplementary Table S1. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)
    Clustal W Program Within The Megalign Of The Dnastar Software Package, supplied by DNASTAR, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    clustal w within the megalign program  (DNASTAR)
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    DNASTAR clustal w within the megalign program
    Fig. 1. Molecular characterization of CPB proteasome subunit beta type-5 (CPB-PSMB5). (A) Prediction of signature motifs and alignment of nucleotide sequences of CPB-PSMB5 with other four well-known insect and potato plant PSMB5. Sequence alignment used Clustal W program of <t>MegAlign</t> (DNASTAR, Version 7.0). Species acronyms and GenBank accession numbers of PSMB5 amino acids are listed in Table S1. (B) Predicted three-dimensional structure of CPB-PSMB5 showing key structural domains. Alpha-helices and beta-sheets are depicted in the model as cyan, and yellow, respectively. The beta subunit interaction site domain is highlighted in brown. Green regions represent the active site. (C) Phylogenetic tree of CPB-PSMB5 (highlighted in a red rounded rectangle) and other PSMB5 sequences from different insect orders. The tree was generated with MEGA 7 using Neighbor-joining method. Bootstrap values on nodes were obtained with 1000 replicates. GenBank accession numbers are provided in Supplementary Table S1. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)
    Clustal W Within The Megalign Program, supplied by DNASTAR, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/clustal+w+program+within+megalign/pmc07150892-48-32-34?v=DNASTAR
    Average 90 stars, based on 1 article reviews
    clustal w within the megalign program - by Bioz Stars, 2026-08
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    Fig. 1. Molecular characterization of CPB proteasome subunit beta type-5 (CPB-PSMB5). (A) Prediction of signature motifs and alignment of nucleotide sequences of CPB-PSMB5 with other four well-known insect and potato plant PSMB5. Sequence alignment used Clustal W program of MegAlign (DNASTAR, Version 7.0). Species acronyms and GenBank accession numbers of PSMB5 amino acids are listed in Table S1. (B) Predicted three-dimensional structure of CPB-PSMB5 showing key structural domains. Alpha-helices and beta-sheets are depicted in the model as cyan, and yellow, respectively. The beta subunit interaction site domain is highlighted in brown. Green regions represent the active site. (C) Phylogenetic tree of CPB-PSMB5 (highlighted in a red rounded rectangle) and other PSMB5 sequences from different insect orders. The tree was generated with MEGA 7 using Neighbor-joining method. Bootstrap values on nodes were obtained with 1000 replicates. GenBank accession numbers are provided in Supplementary Table S1. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)

    Journal: Pesticide Biochemistry and Physiology

    Article Title: Development and efficacy of dsRNA pesticides targeting the Colorado potato beetle with enhanced stability via chitosan formulations

    doi: 10.1016/j.pestbp.2025.106606

    Figure Lengend Snippet: Fig. 1. Molecular characterization of CPB proteasome subunit beta type-5 (CPB-PSMB5). (A) Prediction of signature motifs and alignment of nucleotide sequences of CPB-PSMB5 with other four well-known insect and potato plant PSMB5. Sequence alignment used Clustal W program of MegAlign (DNASTAR, Version 7.0). Species acronyms and GenBank accession numbers of PSMB5 amino acids are listed in Table S1. (B) Predicted three-dimensional structure of CPB-PSMB5 showing key structural domains. Alpha-helices and beta-sheets are depicted in the model as cyan, and yellow, respectively. The beta subunit interaction site domain is highlighted in brown. Green regions represent the active site. (C) Phylogenetic tree of CPB-PSMB5 (highlighted in a red rounded rectangle) and other PSMB5 sequences from different insect orders. The tree was generated with MEGA 7 using Neighbor-joining method. Bootstrap values on nodes were obtained with 1000 replicates. GenBank accession numbers are provided in Supplementary Table S1. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)

    Article Snippet: Sequence alignment was performed using the Clustal W program within MegAlign (DNASTAR, Version 7.0).

    Techniques: Sequencing, Generated